STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41053.1Fimbiral protein pilA. (204 aa)    
Predicted Functional Partners:
AKT41052.1
Fimbiral protein pilA.
 
  
 
0.957
AKT41051.1
Fimbrial protein pilA.
 
  
0.953
AKT36711.1
Uncharacterized protein.
 
 
 0.817
gspK
General secretion pathway protein GspK.
  
 
 0.744
AKT36281.1
Competence protein.
 
  
 0.738
AKT41054.1
Uncharacterized protein.
   
 
 0.685
gspF
General secretion pathway protein GspF.
  
  
 0.683
pilC
Pilus biosynthesis protein PilC.
  
  
 0.683
AKT36717.1
Type II secretion system protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.645
AKT39790.1
Uncharacterized protein.
  
 
 0.645
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.