STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41064.1Uncharacterized protein. (447 aa)    
Predicted Functional Partners:
AKT41063.1
NAD-dependent dehydratase.
 
    0.945
truB
Uncharacterized protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
       0.785
AKT41038.1
Epimerase.
 
    0.773
AKT43228.1
ATPase.
  
     0.750
AKT41153.1
NAD-dependent epimerase.
 
    0.736
AKT36229.1
Uncharacterized protein.
  
   0.609
AKT43083.1
Uncharacterized protein.
 
 
 0.600
AKT36393.1
Uncharacterized protein.
  
     0.596
AKT42657.1
NAD-dependent epimerase.
 
    0.535
AKT40814.1
Saccharopine dehydrogenase.
  
    0.454
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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