STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41274.1Uncharacterized protein. (886 aa)    
Predicted Functional Partners:
AKT41278.1
Type VI secretion protein.
 
    0.913
AKT41273.1
Uncharacterized protein.
 
    0.896
AKT41275.1
Uncharacterized protein.
 
    
0.833
AKT40633.1
Type VI secretion protein.
 
    0.788
AKT42453.1
Type VI secretion protein.
 
    0.788
AKT43709.1
Type VI secretion protein.
 
    0.787
AKT41276.1
Uncharacterized protein.
       0.757
AKT40651.1
Uncharacterized protein.
  
     0.741
AKT38892.1
Uncharacterized protein.
 
    0.724
AKT40490.1
Uncharacterized protein.
 
    0.720
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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