STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41448.1Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (257 aa)    
Predicted Functional Partners:
AKT40132.1
Nonribosomal peptide synthase.
 
  
 0.913
AKT42957.1
Nonribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
      0.905
AKT42958.1
Nonribosomal peptide synthase.
      0.905
AKT40133.1
Nonribosomal peptide synthase.
      0.904
AKT37737.1
Uncharacterized protein.
      0.902
AKT41192.1
Uncharacterized protein.
 
  
 0.902
AKT42432.1
Uncharacterized protein.
      0.896
cmdC
Uncharacterized protein.
 
  
 0.851
AKT40725.1
Uncharacterized protein.
 
     0.658
cndF
Amino acid adenylation domain-containing protein.
 
  
 0.590
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.