STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41468.1Epimerase. (278 aa)    
Predicted Functional Partners:
ugd
UDP-glucose 6-dehydrogenase.
  
 0.942
AKT41498.1
NAD-dependent epimerase.
  
  
 
0.927
AKT40585.1
Epimerase.
  
  
 
0.921
galE-4
UDP-glucose 4-epimerase.
  
  
 
0.919
galE-5
UDP-glucose 4-epimerase.
  
  
 
0.912
AKT36485.1
Uncharacterized protein.
     
 0.905
AKT41038.1
Epimerase.
     
  0.900
AKT41063.1
NAD-dependent dehydratase.
     
  0.900
AKT41153.1
NAD-dependent epimerase.
     
  0.900
AKT42657.1
NAD-dependent epimerase.
     
  0.900
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.