Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKT37935.1 | AKT41685.1 | CMC5_020780 | CMC5_058910 | Serine hydrolase. | Amidohydrolase. | 0.502 |
AKT39837.1 | AKT41685.1 | CMC5_039880 | CMC5_058910 | N-formylglutamate amidohydrolase. | Amidohydrolase. | 0.709 |
AKT39837.1 | AKT44181.1 | CMC5_039880 | CMC5_084210 | N-formylglutamate amidohydrolase. | Uncharacterized protein. | 0.502 |
AKT39837.1 | hutH | CMC5_039880 | CMC5_026440 | N-formylglutamate amidohydrolase. | Histidine ammonia-lyase. | 0.468 |
AKT39837.1 | hutH-2 | CMC5_039880 | CMC5_047490 | N-formylglutamate amidohydrolase. | Histidine ammonia-lyase; Has aminomutase and, to a lesser extent, ammonia-lyase activity. Primarily, catalyzes the rearrangement of L-tyrosine to R- beta-tyrosine, which is incorporated into secondary metabolites called chondramides. The aminomutase activity mainly produces R-beta-tyrosine but also S-beta tyrosine in smaller amounts. Does not accept D- tyrosine, L-histidine or L-phenylalanine as substrates. | 0.468 |
AKT39837.1 | hutU | CMC5_039880 | CMC5_002690 | N-formylglutamate amidohydrolase. | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. | 0.554 |
AKT40936.1 | AKT41685.1 | CMC5_050930 | CMC5_058910 | Methyltransferase. | Amidohydrolase. | 0.506 |
AKT41682.1 | AKT41683.1 | CMC5_058880 | CMC5_058890 | Uncharacterized protein. | Uncharacterized protein. | 0.759 |
AKT41682.1 | AKT41684.1 | CMC5_058880 | CMC5_058900 | Uncharacterized protein. | Oligosaccharyl transferase. | 0.843 |
AKT41682.1 | AKT41685.1 | CMC5_058880 | CMC5_058910 | Uncharacterized protein. | Amidohydrolase. | 0.576 |
AKT41683.1 | AKT41682.1 | CMC5_058890 | CMC5_058880 | Uncharacterized protein. | Uncharacterized protein. | 0.759 |
AKT41683.1 | AKT41684.1 | CMC5_058890 | CMC5_058900 | Uncharacterized protein. | Oligosaccharyl transferase. | 0.857 |
AKT41683.1 | AKT41685.1 | CMC5_058890 | CMC5_058910 | Uncharacterized protein. | Amidohydrolase. | 0.592 |
AKT41684.1 | AKT41682.1 | CMC5_058900 | CMC5_058880 | Oligosaccharyl transferase. | Uncharacterized protein. | 0.843 |
AKT41684.1 | AKT41683.1 | CMC5_058900 | CMC5_058890 | Oligosaccharyl transferase. | Uncharacterized protein. | 0.857 |
AKT41684.1 | AKT41685.1 | CMC5_058900 | CMC5_058910 | Oligosaccharyl transferase. | Amidohydrolase. | 0.602 |
AKT41685.1 | AKT37935.1 | CMC5_058910 | CMC5_020780 | Amidohydrolase. | Serine hydrolase. | 0.502 |
AKT41685.1 | AKT39837.1 | CMC5_058910 | CMC5_039880 | Amidohydrolase. | N-formylglutamate amidohydrolase. | 0.709 |
AKT41685.1 | AKT40936.1 | CMC5_058910 | CMC5_050930 | Amidohydrolase. | Methyltransferase. | 0.506 |
AKT41685.1 | AKT41682.1 | CMC5_058910 | CMC5_058880 | Amidohydrolase. | Uncharacterized protein. | 0.576 |
page 1 of 3