STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT41742.1Gluconolactonase. (345 aa)    
Predicted Functional Partners:
gntK
Gluconate kinase.
    
 0.909
AKT43970.1
Uncharacterized protein.
   
 0.732
AKT44123.1
Uncharacterized protein.
 
  
 0.657
AKT41741.1
Uncharacterized protein.
 
     0.602
AKT44138.1
Glucose-fructose oxidoreductase.
 
  
 0.597
AKT35963.1
Oxidoreductase.
 
  
 0.539
AKT37765.1
Uncharacterized protein.
   
 0.528
AKT41739.1
Uncharacterized protein.
      0.504
AKT40104.1
Uncharacterized protein.
     0.493
AKT41740.1
Uncharacterized protein.
       0.490
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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