STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atoB-7acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)    
Predicted Functional Partners:
AKT43971.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.999
croE
3-hydroxy-3-methylglutaryl-ACP synthase.
  
 0.986
paaG
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.971
fadE-6
acyl-CoA dehydrogenase.
  
 0.939
fadE-7
acyl-CoA dehydrogenase.
  
 0.939
fadE-9
acyl-CoA dehydrogenase.
 
 0.939
fadE-15
acyl-CoA dehydrogenase.
  
 0.939
fadE-18
acyl-CoA dehydrogenase.
  
 0.939
AKT43397.1
methylmalonyl-CoA carboxyltransferase.
  
 0.935
mvaB
hydroxymethylglutaryl-CoA lyase.
  
 
 0.931
Your Current Organism:
Chondromyces crocatus
NCBI taxonomy Id: 52
Other names: C. crocatus, DSM 14714, JCM 12616, Myxobotrys variabilis, TC 601, strain Cm c5
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