STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grdA1_1Glycine/sarcosine/betaine reductase complex component A1. (96 aa)    
Predicted Functional Partners:
grdB
Glycine reductase complex component B subunit gamma.
 
   
 0.970
grdA1_2
Glycine/sarcosine/betaine reductase complex component A1.
 
  
  0.962
grdE
Glycine reductase complex component B subunits alpha and beta.
 
   
 0.952
KXG78889.1
Hypothetical protein.
 
   
 0.900
grdC
Glycine/sarcosine/betaine reductase complex component C subunit beta.
 
   
 0.876
grdD
Glycine/sarcosine/betaine reductase complex component C subunit alpha; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
 
   
 0.870
trxA
Thioredoxin; Belongs to the thioredoxin family.
 
   
 0.864
trxB_1
Thioredoxin reductase.
 
   
 0.835
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
      
 0.482
KXG74069.1
Thioredoxin C-1; Belongs to the thioredoxin family.
     
 0.451
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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