Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG78906.1 | cbiD | AN619_00650 | AN619_00720 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.987 |
KXG78906.1 | cbiF | AN619_00650 | AN619_00680 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-4 C(11)-methyltransferase. | 0.999 |
KXG78906.1 | cbiJ | AN619_00650 | AN619_00640 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-6A reductase. | 0.999 |
KXG78906.1 | cbiL | AN619_00650 | AN619_00690 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.998 |
KXG78906.1 | cysG | AN619_00650 | AN619_00630 | Cobalt-factor III methyltransferase. | Siroheme synthase. | 0.987 |
KXG78906.1 | hemA | AN619_00650 | AN619_00660 | Cobalt-factor III methyltransferase. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.713 |
KXG78906.1 | hemB | AN619_00650 | AN619_00600 | Cobalt-factor III methyltransferase. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.828 |
KXG78906.1 | hemC | AN619_00650 | AN619_00620 | Cobalt-factor III methyltransferase. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.831 |
KXG78906.1 | hemL | AN619_00650 | AN619_00590 | Cobalt-factor III methyltransferase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.822 |
KXG78906.1 | nasF | AN619_00650 | AN619_00610 | Cobalt-factor III methyltransferase. | Uroporphyrinogen-III C-methyltransferase. | 0.991 |
cbiD | KXG78906.1 | AN619_00720 | AN619_00650 | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | Cobalt-factor III methyltransferase. | 0.987 |
cbiD | cbiF | AN619_00720 | AN619_00680 | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | Cobalt-precorrin-4 C(11)-methyltransferase. | 0.991 |
cbiD | cbiJ | AN619_00720 | AN619_00640 | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | Cobalt-precorrin-6A reductase. | 0.998 |
cbiD | cbiL | AN619_00720 | AN619_00690 | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | Cobalt-precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.992 |
cbiD | cysG | AN619_00720 | AN619_00630 | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | Siroheme synthase. | 0.827 |
cbiD | hemA | AN619_00720 | AN619_00660 | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.757 |
cbiD | hemB | AN619_00720 | AN619_00600 | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.594 |
cbiD | hemC | AN619_00720 | AN619_00620 | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.671 |
cbiD | hemL | AN619_00720 | AN619_00590 | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.666 |
cbiD | nasF | AN619_00720 | AN619_00610 | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | Uroporphyrinogen-III C-methyltransferase. | 0.863 |
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