Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG78906.1 | cbiC | AN619_00650 | AN619_00730 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-8 methylmutase. | 0.998 |
KXG78906.1 | cbiD | AN619_00650 | AN619_00720 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.987 |
KXG78906.1 | cbiE | AN619_00650 | AN619_00710 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-7 C(5)-methyltransferase. | 0.902 |
KXG78906.1 | cbiET | AN619_00650 | AN619_00700 | Cobalt-factor III methyltransferase. | Cobalamin biosynthesis bifunctional protein CbiET. | 0.973 |
KXG78906.1 | cbiF | AN619_00650 | AN619_00680 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-4 C(11)-methyltransferase. | 0.999 |
KXG78906.1 | cbiG | AN619_00650 | AN619_00670 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-5A hydrolase. | 0.999 |
KXG78906.1 | cbiJ | AN619_00650 | AN619_00640 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-6A reductase. | 0.999 |
KXG78906.1 | cbiL | AN619_00650 | AN619_00690 | Cobalt-factor III methyltransferase. | Cobalt-precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.998 |
KXG78906.1 | cobQ | AN619_00650 | AN619_00780 | Cobalt-factor III methyltransferase. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.997 |
KXG78906.1 | cysG | AN619_00650 | AN619_00630 | Cobalt-factor III methyltransferase. | Siroheme synthase. | 0.987 |
cbiC | KXG78906.1 | AN619_00730 | AN619_00650 | Cobalt-precorrin-8 methylmutase. | Cobalt-factor III methyltransferase. | 0.998 |
cbiC | cbiD | AN619_00730 | AN619_00720 | Cobalt-precorrin-8 methylmutase. | Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.998 |
cbiC | cbiE | AN619_00730 | AN619_00710 | Cobalt-precorrin-8 methylmutase. | Cobalt-precorrin-7 C(5)-methyltransferase. | 0.998 |
cbiC | cbiET | AN619_00730 | AN619_00700 | Cobalt-precorrin-8 methylmutase. | Cobalamin biosynthesis bifunctional protein CbiET. | 0.997 |
cbiC | cbiF | AN619_00730 | AN619_00680 | Cobalt-precorrin-8 methylmutase. | Cobalt-precorrin-4 C(11)-methyltransferase. | 0.999 |
cbiC | cbiG | AN619_00730 | AN619_00670 | Cobalt-precorrin-8 methylmutase. | Cobalt-precorrin-5A hydrolase. | 0.994 |
cbiC | cbiJ | AN619_00730 | AN619_00640 | Cobalt-precorrin-8 methylmutase. | Cobalt-precorrin-6A reductase. | 0.999 |
cbiC | cbiL | AN619_00730 | AN619_00690 | Cobalt-precorrin-8 methylmutase. | Cobalt-precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.999 |
cbiC | cobQ | AN619_00730 | AN619_00780 | Cobalt-precorrin-8 methylmutase. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.999 |
cbiC | cysG | AN619_00730 | AN619_00630 | Cobalt-precorrin-8 methylmutase. | Siroheme synthase. | 0.652 |
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