Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cooS1 | hcp_1 | AN619_10750 | AN619_01610 | Carbon monoxide dehydrogenase 1. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.601 |
cooS1 | hndC_1 | AN619_10750 | AN619_04240 | Carbon monoxide dehydrogenase 1. | NADP-reducing hydrogenase subunit HndC. | 0.700 |
cooS1 | hndC_4 | AN619_10750 | AN619_29080 | Carbon monoxide dehydrogenase 1. | NADP-reducing hydrogenase subunit HndC. | 0.700 |
cooS1 | korA_2 | AN619_10750 | AN619_09950 | Carbon monoxide dehydrogenase 1. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.614 |
cooS1 | nasD_1 | AN619_10750 | AN619_24250 | Carbon monoxide dehydrogenase 1. | Nitrite reductase [NAD(P)H]. | 0.598 |
cooS1 | nasD_2 | AN619_10750 | AN619_24450 | Carbon monoxide dehydrogenase 1. | Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.598 |
cooS1 | por_1 | AN619_10750 | AN619_01900 | Carbon monoxide dehydrogenase 1. | Pyruvate synthase. | 0.938 |
cooS1 | por_2 | AN619_10750 | AN619_03950 | Carbon monoxide dehydrogenase 1. | Pyruvate synthase. | 0.938 |
gdh | hcp_1 | AN619_16370 | AN619_01610 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.592 |
gdh | hndC_1 | AN619_16370 | AN619_04240 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NADP-reducing hydrogenase subunit HndC. | 0.492 |
gdh | hndC_4 | AN619_16370 | AN619_29080 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NADP-reducing hydrogenase subunit HndC. | 0.492 |
gdh | korA_2 | AN619_16370 | AN619_09950 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.691 |
gdh | por_1 | AN619_16370 | AN619_01900 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Pyruvate synthase. | 0.945 |
gdh | por_2 | AN619_16370 | AN619_03950 | NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Pyruvate synthase. | 0.945 |
gdhA | hcp_1 | AN619_19590 | AN619_01610 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.592 |
gdhA | hndC_1 | AN619_19590 | AN619_04240 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NADP-reducing hydrogenase subunit HndC. | 0.492 |
gdhA | hndC_4 | AN619_19590 | AN619_29080 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NADP-reducing hydrogenase subunit HndC. | 0.492 |
gdhA | korA_2 | AN619_19590 | AN619_09950 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.691 |
gdhA | por_1 | AN619_19590 | AN619_01900 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Pyruvate synthase. | 0.945 |
gdhA | por_2 | AN619_19590 | AN619_03950 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Pyruvate synthase. | 0.945 |
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