STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadR_2Fatty acid metabolism regulator protein. (210 aa)    
Predicted Functional Partners:
KXG77463.1
Hypothetical protein.
 
     0.956
KXG77462.1
Hypothetical protein.
 
  
 0.952
KXG77464.1
Fluoroquinolones export ATP-binding protein.
 
  
 0.948
KXG77461.1
Hypothetical protein.
       0.721
tmoS
Sensor histidine kinase TmoS.
     
 0.516
ydhD_1
Putative sporulation-specific glycosylase YdhD.
 
     0.488
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.466
KXG76409.1
Hypothetical protein.
  
     0.462
KXG76482.1
Putative ABC transporter ATP-binding protein.
  
 
 0.453
gmr_1
Cyclic di-GMP phosphodiesterase Gmr.
    
 
 0.440
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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