Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG77484.1 | KXG77485.1 | AN619_04690 | AN619_04700 | Hypothetical protein. | Hypothetical protein. | 0.752 |
KXG77484.1 | KXG77486.1 | AN619_04690 | AN619_04710 | Hypothetical protein. | Hypothetical protein. | 0.752 |
KXG77485.1 | KXG77484.1 | AN619_04700 | AN619_04690 | Hypothetical protein. | Hypothetical protein. | 0.752 |
KXG77485.1 | KXG77486.1 | AN619_04700 | AN619_04710 | Hypothetical protein. | Hypothetical protein. | 0.775 |
KXG77486.1 | KXG77484.1 | AN619_04710 | AN619_04690 | Hypothetical protein. | Hypothetical protein. | 0.752 |
KXG77486.1 | KXG77485.1 | AN619_04710 | AN619_04700 | Hypothetical protein. | Hypothetical protein. | 0.775 |
KXG77486.1 | cheR | AN619_04710 | AN619_08490 | Hypothetical protein. | Chemotaxis protein methyltransferase. | 0.603 |
KXG77486.1 | rpoA | AN619_04710 | AN619_20950 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.474 |
KXG77486.1 | rpoB | AN619_04710 | AN619_21310 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.637 |
KXG77486.1 | rpoC | AN619_04710 | AN619_21300 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.653 |
KXG77486.1 | rpoZ | AN619_04710 | AN619_14440 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.474 |
KXG77486.1 | rsiW | AN619_04710 | AN619_06260 | Hypothetical protein. | Anti-sigma-W factor RsiW. | 0.672 |
cheR | KXG77486.1 | AN619_08490 | AN619_04710 | Chemotaxis protein methyltransferase. | Hypothetical protein. | 0.603 |
rpoA | KXG77486.1 | AN619_20950 | AN619_04710 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Hypothetical protein. | 0.474 |
rpoA | rpoB | AN619_20950 | AN619_21310 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rpoA | rpoC | AN619_20950 | AN619_21300 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rpoA | rpoZ | AN619_20950 | AN619_14440 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
rpoB | KXG77486.1 | AN619_21310 | AN619_04710 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Hypothetical protein. | 0.637 |
rpoB | rpoA | AN619_21310 | AN619_20950 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rpoB | rpoC | AN619_21310 | AN619_21300 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
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