Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG74447.1 | envC_1 | AN619_23450 | AN619_23340 | Hypothetical protein. | Murein hydrolase activator EnvC. | 0.474 |
KXG74447.1 | lytB_1 | AN619_23450 | AN619_05430 | Hypothetical protein. | Amidase enhancer. | 0.590 |
KXG77010.1 | KXG77017.1 | AN619_05370 | AN619_05440 | Hypothetical protein. | Hypothetical protein. | 0.453 |
KXG77010.1 | lytB_1 | AN619_05370 | AN619_05430 | Hypothetical protein. | Amidase enhancer. | 0.476 |
KXG77010.1 | queA | AN619_05370 | AN619_05420 | Hypothetical protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.663 |
KXG77010.1 | ruvA | AN619_05370 | AN619_05460 | Hypothetical protein. | Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.507 |
KXG77010.1 | ruvB | AN619_05370 | AN619_05450 | Hypothetical protein. | Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.510 |
KXG77010.1 | ruvC | AN619_05370 | AN619_05470 | Hypothetical protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.481 |
KXG77010.1 | tgt | AN619_05370 | AN619_05380 | Hypothetical protein. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.830 |
KXG77017.1 | KXG77010.1 | AN619_05440 | AN619_05370 | Hypothetical protein. | Hypothetical protein. | 0.453 |
KXG77017.1 | lytB_1 | AN619_05440 | AN619_05430 | Hypothetical protein. | Amidase enhancer. | 0.661 |
KXG77017.1 | queA | AN619_05440 | AN619_05420 | Hypothetical protein. | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.788 |
KXG77017.1 | ruvA | AN619_05440 | AN619_05460 | Hypothetical protein. | Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.873 |
KXG77017.1 | ruvB | AN619_05440 | AN619_05450 | Hypothetical protein. | Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.948 |
KXG77017.1 | ruvC | AN619_05440 | AN619_05470 | Hypothetical protein. | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.814 |
KXG77017.1 | tgt | AN619_05440 | AN619_05380 | Hypothetical protein. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.533 |
envC_1 | KXG74447.1 | AN619_23340 | AN619_23450 | Murein hydrolase activator EnvC. | Hypothetical protein. | 0.474 |
envC_1 | lytB_1 | AN619_23340 | AN619_05430 | Murein hydrolase activator EnvC. | Amidase enhancer. | 0.508 |
lytB_1 | KXG74447.1 | AN619_05430 | AN619_23450 | Amidase enhancer. | Hypothetical protein. | 0.590 |
lytB_1 | KXG77010.1 | AN619_05430 | AN619_05370 | Amidase enhancer. | Hypothetical protein. | 0.476 |
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