Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG77046.1 | KXG77049.1 | AN619_05740 | AN619_05770 | Hypothetical protein. | Hypothetical protein. | 0.653 |
KXG77046.1 | KXG77050.1 | AN619_05740 | AN619_05780 | Hypothetical protein. | Hypothetical protein. | 0.761 |
KXG77046.1 | nadD | AN619_05740 | AN619_05690 | Hypothetical protein. | Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.539 |
KXG77046.1 | obg | AN619_05740 | AN619_05720 | Hypothetical protein. | GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.643 |
KXG77046.1 | rng | AN619_05740 | AN619_05760 | Hypothetical protein. | Ribonuclease G. | 0.672 |
KXG77046.1 | rplU | AN619_05740 | AN619_05750 | Hypothetical protein. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.986 |
KXG77046.1 | rpmA | AN619_05740 | AN619_05730 | Hypothetical protein. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.997 |
KXG77046.1 | spoIVFB | AN619_05740 | AN619_05790 | Hypothetical protein. | Stage IV sporulation protein FB. | 0.568 |
KXG77046.1 | yhbY | AN619_05740 | AN619_05700 | Hypothetical protein. | RNA-binding protein YhbY. | 0.618 |
KXG77049.1 | KXG77046.1 | AN619_05770 | AN619_05740 | Hypothetical protein. | Hypothetical protein. | 0.653 |
KXG77049.1 | KXG77050.1 | AN619_05770 | AN619_05780 | Hypothetical protein. | Hypothetical protein. | 0.996 |
KXG77049.1 | mepM_1 | AN619_05770 | AN619_05800 | Hypothetical protein. | Murein DD-endopeptidase MepM. | 0.528 |
KXG77049.1 | nadD | AN619_05770 | AN619_05690 | Hypothetical protein. | Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.491 |
KXG77049.1 | obg | AN619_05770 | AN619_05720 | Hypothetical protein. | GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.555 |
KXG77049.1 | rng | AN619_05770 | AN619_05760 | Hypothetical protein. | Ribonuclease G. | 0.801 |
KXG77049.1 | rplU | AN619_05770 | AN619_05750 | Hypothetical protein. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.649 |
KXG77049.1 | rpmA | AN619_05770 | AN619_05730 | Hypothetical protein. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.642 |
KXG77049.1 | spoIVFB | AN619_05770 | AN619_05790 | Hypothetical protein. | Stage IV sporulation protein FB. | 0.697 |
KXG77049.1 | yhbY | AN619_05770 | AN619_05700 | Hypothetical protein. | RNA-binding protein YhbY. | 0.531 |
KXG77050.1 | KXG77046.1 | AN619_05780 | AN619_05740 | Hypothetical protein. | Hypothetical protein. | 0.761 |
page 1 of 5