Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG77055.1 | apbE | AN619_05830 | AN619_05820 | Hypothetical protein. | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.878 |
KXG77055.1 | hepT_2 | AN619_05830 | AN619_05810 | Hypothetical protein. | Heptaprenyl diphosphate synthase component 2; Belongs to the FPP/GGPP synthase family. | 0.694 |
KXG77055.1 | yjlD | AN619_05830 | AN619_05840 | Hypothetical protein. | NADH dehydrogenase-like protein YjlD. | 0.886 |
apbE | KXG77055.1 | AN619_05820 | AN619_05830 | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Hypothetical protein. | 0.878 |
apbE | hepT_2 | AN619_05820 | AN619_05810 | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Heptaprenyl diphosphate synthase component 2; Belongs to the FPP/GGPP synthase family. | 0.833 |
apbE | hndC_1 | AN619_05820 | AN619_04240 | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | NADP-reducing hydrogenase subunit HndC. | 0.572 |
apbE | hndC_4 | AN619_05820 | AN619_29080 | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | NADP-reducing hydrogenase subunit HndC. | 0.572 |
apbE | menA | AN619_05820 | AN619_03480 | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.535 |
apbE | nox | AN619_05820 | AN619_00290 | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | NADH oxidase. | 0.580 |
apbE | rsxB | AN619_05820 | AN619_05990 | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.648 |
apbE | yjlD | AN619_05820 | AN619_05840 | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | NADH dehydrogenase-like protein YjlD. | 0.671 |
hepT_2 | KXG77055.1 | AN619_05810 | AN619_05830 | Heptaprenyl diphosphate synthase component 2; Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.694 |
hepT_2 | apbE | AN619_05810 | AN619_05820 | Heptaprenyl diphosphate synthase component 2; Belongs to the FPP/GGPP synthase family. | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.833 |
hepT_2 | menA | AN619_05810 | AN619_03480 | Heptaprenyl diphosphate synthase component 2; Belongs to the FPP/GGPP synthase family. | 1,4-dihydroxy-2-naphthoate octaprenyltransferase. | 0.785 |
hepT_2 | yjlD | AN619_05810 | AN619_05840 | Heptaprenyl diphosphate synthase component 2; Belongs to the FPP/GGPP synthase family. | NADH dehydrogenase-like protein YjlD. | 0.853 |
hndC_1 | apbE | AN619_04240 | AN619_05820 | NADP-reducing hydrogenase subunit HndC. | FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. | 0.572 |
hndC_1 | hndC_3 | AN619_04240 | AN619_26070 | NADP-reducing hydrogenase subunit HndC. | NADP-reducing hydrogenase subunit HndC. | 0.946 |
hndC_1 | hndC_4 | AN619_04240 | AN619_29080 | NADP-reducing hydrogenase subunit HndC. | NADP-reducing hydrogenase subunit HndC. | 0.960 |
hndC_1 | nox | AN619_04240 | AN619_00290 | NADP-reducing hydrogenase subunit HndC. | NADH oxidase. | 0.477 |
hndC_1 | rsxB | AN619_04240 | AN619_05990 | NADP-reducing hydrogenase subunit HndC. | Electron transport complex subunit RsxB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.983 |
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