STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mepM_2Murein DD-endopeptidase MepM. (322 aa)    
Predicted Functional Partners:
KXG77187.1
Hypothetical protein.
 
   
 0.938
fliN
Flagellar motor switch protein FliN.
   
   0.828
cphA
Cyanophycin synthetase; Belongs to the MurCDEF family.
    
 0.709
mrcA
Penicillin-binding protein 1A.
  
   
 0.675
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
   
 0.543
slt_1
Soluble lytic murein transglycosylase.
 
   
 0.538
KXG76665.1
Hypothetical protein.
  
 
 0.508
lytC_2
N-acetylmuramoyl-L-alanine amidase LytC.
 
   
 0.505
KXG77185.1
Hypothetical protein.
       0.492
mltG
Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
  
 0.449
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.