Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG77201.1 | KXG77202.1 | AN619_07310 | AN619_07320 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KXG77201.1 | ypdA_1 | AN619_07310 | AN619_07300 | Hypothetical protein. | Sensor histidine kinase YpdA. | 0.578 |
KXG77201.1 | ypdB_1 | AN619_07310 | AN619_07290 | Hypothetical protein. | Transcriptional regulatory protein YpdB. | 0.578 |
KXG77202.1 | KXG77201.1 | AN619_07320 | AN619_07310 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KXG77202.1 | ypdA_1 | AN619_07320 | AN619_07300 | Hypothetical protein. | Sensor histidine kinase YpdA. | 0.578 |
KXG77202.1 | ypdB_1 | AN619_07320 | AN619_07290 | Hypothetical protein. | Transcriptional regulatory protein YpdB. | 0.578 |
citS | dcuS_1 | AN619_29980 | AN619_25380 | Sensor protein CitS. | Sensor histidine kinase DcuS. | 0.687 |
citS | dcuS_3 | AN619_29980 | AN619_30800 | Sensor protein CitS. | Sensor histidine kinase DcuS. | 0.678 |
citS | dpiB_1 | AN619_29980 | AN619_09490 | Sensor protein CitS. | Sensor histidine kinase DpiB. | 0.696 |
citS | ypdB_1 | AN619_29980 | AN619_07290 | Sensor protein CitS. | Transcriptional regulatory protein YpdB. | 0.450 |
citS | ypdB_3 | AN619_29980 | AN619_29970 | Sensor protein CitS. | Transcriptional regulatory protein YpdB. | 0.972 |
cstA_1 | ypdA_1 | AN619_07280 | AN619_07300 | Carbon starvation protein A. | Sensor histidine kinase YpdA. | 0.627 |
cstA_1 | ypdB_1 | AN619_07280 | AN619_07290 | Carbon starvation protein A. | Transcriptional regulatory protein YpdB. | 0.555 |
dcuS_1 | citS | AN619_25380 | AN619_29980 | Sensor histidine kinase DcuS. | Sensor protein CitS. | 0.687 |
dcuS_1 | ypdB_1 | AN619_25380 | AN619_07290 | Sensor histidine kinase DcuS. | Transcriptional regulatory protein YpdB. | 0.400 |
dcuS_1 | ypdB_3 | AN619_25380 | AN619_29970 | Sensor histidine kinase DcuS. | Transcriptional regulatory protein YpdB. | 0.645 |
dcuS_3 | citS | AN619_30800 | AN619_29980 | Sensor histidine kinase DcuS. | Sensor protein CitS. | 0.678 |
dcuS_3 | ypdA_2 | AN619_30800 | AN619_22160 | Sensor histidine kinase DcuS. | Sensor histidine kinase YpdA. | 0.410 |
dcuS_3 | ypdB_1 | AN619_30800 | AN619_07290 | Sensor histidine kinase DcuS. | Transcriptional regulatory protein YpdB. | 0.503 |
dcuS_3 | ypdB_3 | AN619_30800 | AN619_29970 | Sensor histidine kinase DcuS. | Transcriptional regulatory protein YpdB. | 0.635 |
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