Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG76796.1 | KXG76799.1 | AN619_07880 | AN619_07910 | Hypothetical protein. | Alkaline shock protein 23. | 0.679 |
KXG76796.1 | KXG76800.1 | AN619_07880 | AN619_07920 | Hypothetical protein. | Hypothetical protein. | 0.656 |
KXG76796.1 | KXG76801.1 | AN619_07880 | AN619_07930 | Hypothetical protein. | Hypothetical protein. | 0.744 |
KXG76796.1 | KXG76807.1 | AN619_07880 | AN619_07990 | Hypothetical protein. | Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.535 |
KXG76796.1 | folD | AN619_07880 | AN619_07960 | Hypothetical protein. | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.532 |
KXG76796.1 | nusB | AN619_07880 | AN619_07940 | Hypothetical protein. | Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.545 |
KXG76796.1 | spoIIIAH | AN619_07880 | AN619_07900 | Hypothetical protein. | Stage III sporulation protein AH. | 0.922 |
KXG76796.1 | tsaD_1 | AN619_07880 | AN619_07950 | Hypothetical protein. | tRNA N6-adenosine threonylcarbamoyltransferase. | 0.470 |
KXG76796.1 | xseA | AN619_07880 | AN619_07970 | Hypothetical protein. | Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.537 |
KXG76796.1 | xseB | AN619_07880 | AN619_07980 | Hypothetical protein. | Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.517 |
KXG76799.1 | KXG76796.1 | AN619_07910 | AN619_07880 | Alkaline shock protein 23. | Hypothetical protein. | 0.679 |
KXG76799.1 | KXG76800.1 | AN619_07910 | AN619_07920 | Alkaline shock protein 23. | Hypothetical protein. | 0.858 |
KXG76799.1 | KXG76801.1 | AN619_07910 | AN619_07930 | Alkaline shock protein 23. | Hypothetical protein. | 0.754 |
KXG76799.1 | KXG76807.1 | AN619_07910 | AN619_07990 | Alkaline shock protein 23. | Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.609 |
KXG76799.1 | folD | AN619_07910 | AN619_07960 | Alkaline shock protein 23. | Bifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.621 |
KXG76799.1 | nusB | AN619_07910 | AN619_07940 | Alkaline shock protein 23. | Hypothetical protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.659 |
KXG76799.1 | spoIIIAH | AN619_07910 | AN619_07900 | Alkaline shock protein 23. | Stage III sporulation protein AH. | 0.714 |
KXG76799.1 | tsaD_1 | AN619_07910 | AN619_07950 | Alkaline shock protein 23. | tRNA N6-adenosine threonylcarbamoyltransferase. | 0.613 |
KXG76799.1 | xseA | AN619_07910 | AN619_07970 | Alkaline shock protein 23. | Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.609 |
KXG76799.1 | xseB | AN619_07910 | AN619_07980 | Alkaline shock protein 23. | Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.591 |
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