Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG76197.1 | sigF_2 | AN619_11540 | AN619_14020 | Hypothetical protein. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.837 |
KXG76197.1 | spoIIIAE | AN619_11540 | AN619_07870 | Hypothetical protein. | Stage III sporulation protein AE. | 0.788 |
KXG76197.1 | spoIVB | AN619_11540 | AN619_08060 | Hypothetical protein. | SpoIVB peptidase. | 0.814 |
KXG76197.1 | tepA | AN619_11540 | AN619_15610 | Hypothetical protein. | Translocation-enhancing protein TepA. | 0.727 |
KXG76197.1 | ylbJ_1 | AN619_11540 | AN619_14660 | Hypothetical protein. | Sporulation integral membrane protein YlbJ. | 0.788 |
KXG76197.1 | ypeB_1 | AN619_11540 | AN619_03410 | Hypothetical protein. | Sporulation protein YpeB. | 0.425 |
KXG76197.1 | ypeB_2 | AN619_11540 | AN619_11560 | Hypothetical protein. | Sporulation protein YpeB. | 0.646 |
KXG76197.1 | ytfJ | AN619_11540 | AN619_08280 | Hypothetical protein. | Putative spore protein YtfJ. | 0.664 |
KXG76197.1 | yunB | AN619_11540 | AN619_25100 | Hypothetical protein. | Sporulation protein YunB. | 0.577 |
KXG76835.1 | spoIIIAE | AN619_08270 | AN619_07870 | Hypothetical protein. | Stage III sporulation protein AE. | 0.619 |
KXG76835.1 | ylbJ_1 | AN619_08270 | AN619_14660 | Hypothetical protein. | Sporulation integral membrane protein YlbJ. | 0.550 |
KXG76835.1 | ytfJ | AN619_08270 | AN619_08280 | Hypothetical protein. | Putative spore protein YtfJ. | 0.920 |
sigF_2 | KXG76197.1 | AN619_14020 | AN619_11540 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein. | 0.837 |
sigF_2 | spoIIIAE | AN619_14020 | AN619_07870 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage III sporulation protein AE. | 0.741 |
sigF_2 | spoIVB | AN619_14020 | AN619_08060 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | SpoIVB peptidase. | 0.766 |
sigF_2 | tepA | AN619_14020 | AN619_15610 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Translocation-enhancing protein TepA. | 0.654 |
sigF_2 | ylbJ_1 | AN619_14020 | AN619_14660 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sporulation integral membrane protein YlbJ. | 0.744 |
sigF_2 | ytfJ | AN619_14020 | AN619_08280 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative spore protein YtfJ. | 0.723 |
spoIIIAE | KXG76197.1 | AN619_07870 | AN619_11540 | Stage III sporulation protein AE. | Hypothetical protein. | 0.788 |
spoIIIAE | KXG76835.1 | AN619_07870 | AN619_08270 | Stage III sporulation protein AE. | Hypothetical protein. | 0.619 |
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