Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG76431.1 | fabG_1 | AN619_09620 | AN619_09610 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.846 |
KXG76431.1 | fabH_5 | AN619_09620 | AN619_09630 | Hypothetical protein. | 3-oxoacyl-[acyl-carrier-protein] synthase 3; Belongs to the thiolase-like superfamily. FabH family. | 0.737 |
KXG76431.1 | por_1 | AN619_09620 | AN619_01900 | Hypothetical protein. | Pyruvate synthase. | 0.993 |
KXG76431.1 | por_2 | AN619_09620 | AN619_03950 | Hypothetical protein. | Pyruvate synthase. | 0.993 |
crp_1 | fabG_1 | AN619_18750 | AN619_09610 | cAMP-activated global transcriptional regulator CRP. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.829 |
crp_1 | por_1 | AN619_18750 | AN619_01900 | cAMP-activated global transcriptional regulator CRP. | Pyruvate synthase. | 0.883 |
crp_1 | por_2 | AN619_18750 | AN619_03950 | cAMP-activated global transcriptional regulator CRP. | Pyruvate synthase. | 0.883 |
crp_1 | queD | AN619_18750 | AN619_04660 | cAMP-activated global transcriptional regulator CRP. | 6-carboxy-5,6,7,8-tetrahydropterin synthase. | 0.939 |
crp_2 | fabG_1 | AN619_24240 | AN619_09610 | cAMP receptor protein. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.829 |
crp_2 | por_1 | AN619_24240 | AN619_01900 | cAMP receptor protein. | Pyruvate synthase. | 0.883 |
crp_2 | por_2 | AN619_24240 | AN619_03950 | cAMP receptor protein. | Pyruvate synthase. | 0.883 |
crp_2 | queD | AN619_24240 | AN619_04660 | cAMP receptor protein. | 6-carboxy-5,6,7,8-tetrahydropterin synthase. | 0.939 |
fabD | fabF | AN619_14760 | AN619_00020 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.999 |
fabD | fabG_1 | AN619_14760 | AN619_09610 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.932 |
fabD | fabH_5 | AN619_14760 | AN619_09630 | Malonyl CoA-acyl carrier protein transacylase. | 3-oxoacyl-[acyl-carrier-protein] synthase 3; Belongs to the thiolase-like superfamily. FabH family. | 0.838 |
fabD | fabZ | AN619_14760 | AN619_12340 | Malonyl CoA-acyl carrier protein transacylase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. | 0.992 |
fabD | por_1 | AN619_14760 | AN619_01900 | Malonyl CoA-acyl carrier protein transacylase. | Pyruvate synthase. | 0.868 |
fabD | por_2 | AN619_14760 | AN619_03950 | Malonyl CoA-acyl carrier protein transacylase. | Pyruvate synthase. | 0.868 |
fabF | fabD | AN619_00020 | AN619_14760 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Malonyl CoA-acyl carrier protein transacylase. | 0.999 |
fabF | fabG_1 | AN619_00020 | AN619_09610 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.937 |
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