STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuBHigh-affinity zinc uptake system membrane protein ZnuB. (278 aa)    
Predicted Functional Partners:
znuA
High-affinity zinc uptake system binding-protein ZnuA; Belongs to the bacterial solute-binding protein 9 family.
 
 0.999
znuC
High-affinity zinc uptake system ATP-binding protein ZnuC.
 0.999
mntR
Transcriptional regulator MntR.
  
 
 0.727
fur_2
Ferric uptake regulation protein; Belongs to the Fur family.
 
  
 0.661
yusV_1
Putative siderophore transport system ATP-binding protein YusV.
   
 0.577
KXG77568.1
Hypothetical protein.
    
 0.484
KXG76481.1
Hypothetical protein.
    
 0.474
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.431
sugC_1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
    
  0.423
sugC_2
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
    
  0.423
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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