Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG75321.1 | KXG76223.1 | AN619_17540 | AN619_11800 | Hypothetical protein. | Hypothetical protein. | 0.502 |
KXG76223.1 | KXG75321.1 | AN619_11800 | AN619_17540 | Hypothetical protein. | Hypothetical protein. | 0.502 |
KXG76223.1 | KXG76225.1 | AN619_11800 | AN619_11820 | Hypothetical protein. | Hypothetical protein. | 0.583 |
KXG76223.1 | cinA | AN619_11800 | AN619_15660 | Hypothetical protein. | Putative competence-damage inducible protein; Belongs to the CinA family. | 0.653 |
KXG76223.1 | dosC | AN619_11800 | AN619_07130 | Hypothetical protein. | Diguanylate cyclase DosC. | 0.637 |
KXG76223.1 | guaA | AN619_11800 | AN619_16020 | Hypothetical protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.636 |
KXG76223.1 | guaB | AN619_11800 | AN619_16030 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.610 |
KXG76223.1 | rpfG_9 | AN619_11800 | AN619_21830 | Hypothetical protein. | Cyclic di-GMP phosphodiesterase response regulator RpfG. | 0.594 |
KXG76223.1 | scpA_1 | AN619_11800 | AN619_08220 | Hypothetical protein. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.750 |
KXG76223.1 | tmoS | AN619_11800 | AN619_04450 | Hypothetical protein. | Sensor histidine kinase TmoS. | 0.501 |
KXG76223.1 | ubiB | AN619_11800 | AN619_11810 | Hypothetical protein. | Putative protein kinase UbiB. | 0.618 |
KXG76225.1 | KXG76223.1 | AN619_11820 | AN619_11800 | Hypothetical protein. | Hypothetical protein. | 0.583 |
KXG76225.1 | ubiB | AN619_11820 | AN619_11810 | Hypothetical protein. | Putative protein kinase UbiB. | 0.768 |
cinA | KXG76223.1 | AN619_15660 | AN619_11800 | Putative competence-damage inducible protein; Belongs to the CinA family. | Hypothetical protein. | 0.653 |
cinA | dosC | AN619_15660 | AN619_07130 | Putative competence-damage inducible protein; Belongs to the CinA family. | Diguanylate cyclase DosC. | 0.426 |
cinA | guaA | AN619_15660 | AN619_16020 | Putative competence-damage inducible protein; Belongs to the CinA family. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.473 |
cinA | guaB | AN619_15660 | AN619_16030 | Putative competence-damage inducible protein; Belongs to the CinA family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.423 |
cinA | rpfG_9 | AN619_15660 | AN619_21830 | Putative competence-damage inducible protein; Belongs to the CinA family. | Cyclic di-GMP phosphodiesterase response regulator RpfG. | 0.410 |
dosC | KXG76223.1 | AN619_07130 | AN619_11800 | Diguanylate cyclase DosC. | Hypothetical protein. | 0.637 |
dosC | cinA | AN619_07130 | AN619_15660 | Diguanylate cyclase DosC. | Putative competence-damage inducible protein; Belongs to the CinA family. | 0.426 |
page 1 of 3