Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
baeR | baeS_2 | AN619_30020 | AN619_12520 | Transcriptional regulatory protein BaeR. | Signal transduction histidine-protein kinase BaeS. | 0.897 |
baeS_2 | baeR | AN619_12520 | AN619_30020 | Signal transduction histidine-protein kinase BaeS. | Transcriptional regulatory protein BaeR. | 0.897 |
baeS_2 | phoP | AN619_12520 | AN619_14110 | Signal transduction histidine-protein kinase BaeS. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.924 |
baeS_2 | regX3_1 | AN619_12520 | AN619_03290 | Signal transduction histidine-protein kinase BaeS. | Sensory transduction protein regX3. | 0.905 |
baeS_2 | regX3_2 | AN619_12520 | AN619_17480 | Signal transduction histidine-protein kinase BaeS. | Sensory transduction protein regX3. | 0.878 |
baeS_2 | walR_1 | AN619_12520 | AN619_05540 | Signal transduction histidine-protein kinase BaeS. | Transcriptional regulatory protein WalR. | 0.902 |
baeS_2 | walR_2 | AN619_12520 | AN619_10660 | Signal transduction histidine-protein kinase BaeS. | Transcriptional regulatory protein WalR. | 0.900 |
baeS_2 | walR_3 | AN619_12520 | AN619_18110 | Signal transduction histidine-protein kinase BaeS. | Transcriptional regulatory protein WalR. | 0.889 |
baeS_2 | walR_4 | AN619_12520 | AN619_25140 | Signal transduction histidine-protein kinase BaeS. | Transcriptional regulatory protein WalR. | 0.867 |
baeS_2 | walR_5 | AN619_12520 | AN619_28360 | Signal transduction histidine-protein kinase BaeS. | Transcriptional regulatory protein WalR. | 0.896 |
baeS_2 | yycF | AN619_12520 | AN619_12530 | Signal transduction histidine-protein kinase BaeS. | Transcriptional regulatory protein YycF. | 0.996 |
phoP | baeS_2 | AN619_14110 | AN619_12520 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Signal transduction histidine-protein kinase BaeS. | 0.924 |
phoP | walR_3 | AN619_14110 | AN619_18110 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Transcriptional regulatory protein WalR. | 0.572 |
regX3_1 | baeS_2 | AN619_03290 | AN619_12520 | Sensory transduction protein regX3. | Signal transduction histidine-protein kinase BaeS. | 0.905 |
regX3_1 | walR_4 | AN619_03290 | AN619_25140 | Sensory transduction protein regX3. | Transcriptional regulatory protein WalR. | 0.410 |
regX3_2 | baeS_2 | AN619_17480 | AN619_12520 | Sensory transduction protein regX3. | Signal transduction histidine-protein kinase BaeS. | 0.878 |
walR_1 | baeS_2 | AN619_05540 | AN619_12520 | Transcriptional regulatory protein WalR. | Signal transduction histidine-protein kinase BaeS. | 0.902 |
walR_1 | walR_4 | AN619_05540 | AN619_25140 | Transcriptional regulatory protein WalR. | Transcriptional regulatory protein WalR. | 0.403 |
walR_2 | baeS_2 | AN619_10660 | AN619_12520 | Transcriptional regulatory protein WalR. | Signal transduction histidine-protein kinase BaeS. | 0.900 |
walR_2 | walR_4 | AN619_10660 | AN619_25140 | Transcriptional regulatory protein WalR. | Transcriptional regulatory protein WalR. | 0.414 |
page 1 of 2