Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG75876.1 | corC | AN619_13390 | AN619_13420 | Hypothetical protein. | Magnesium and cobalt efflux protein CorC. | 0.768 |
KXG75876.1 | dgkA | AN619_13390 | AN619_13410 | Hypothetical protein. | Undecaprenol kinase. | 0.892 |
KXG75876.1 | era | AN619_13390 | AN619_13450 | Hypothetical protein. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.718 |
KXG75876.1 | ybeY | AN619_13390 | AN619_13400 | Hypothetical protein. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.899 |
cdsA | dagK | AN619_15400 | AN619_27760 | Phosphatidate cytidylyltransferase. | Diacylglycerol kinase. | 0.866 |
cdsA | dgkA | AN619_15400 | AN619_13410 | Phosphatidate cytidylyltransferase. | Undecaprenol kinase. | 0.864 |
cdsA | gpsA | AN619_15400 | AN619_14230 | Phosphatidate cytidylyltransferase. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.601 |
cdsA | plsC | AN619_15400 | AN619_19670 | Phosphatidate cytidylyltransferase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.913 |
cdsA | ybeY | AN619_15400 | AN619_13400 | Phosphatidate cytidylyltransferase. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.442 |
corC | KXG75876.1 | AN619_13420 | AN619_13390 | Magnesium and cobalt efflux protein CorC. | Hypothetical protein. | 0.768 |
corC | dgkA | AN619_13420 | AN619_13410 | Magnesium and cobalt efflux protein CorC. | Undecaprenol kinase. | 0.807 |
corC | era | AN619_13420 | AN619_13450 | Magnesium and cobalt efflux protein CorC. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.676 |
corC | ybeY | AN619_13420 | AN619_13400 | Magnesium and cobalt efflux protein CorC. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.895 |
dagK | cdsA | AN619_27760 | AN619_15400 | Diacylglycerol kinase. | Phosphatidate cytidylyltransferase. | 0.866 |
dagK | dgkA | AN619_27760 | AN619_13410 | Diacylglycerol kinase. | Undecaprenol kinase. | 0.846 |
dagK | gpsA | AN619_27760 | AN619_14230 | Diacylglycerol kinase. | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.718 |
dagK | plsC | AN619_27760 | AN619_19670 | Diacylglycerol kinase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.765 |
dagK | ugtP | AN619_27760 | AN619_30810 | Diacylglycerol kinase. | Processive diacylglycerol beta-glucosyltransferase. | 0.684 |
dgkA | KXG75876.1 | AN619_13410 | AN619_13390 | Undecaprenol kinase. | Hypothetical protein. | 0.892 |
dgkA | cdsA | AN619_13410 | AN619_15400 | Undecaprenol kinase. | Phosphatidate cytidylyltransferase. | 0.864 |
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