STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbr3AReverse rubrerythrin-1. (113 aa)    
Predicted Functional Partners:
perR
Transcriptional regulator PerR; Belongs to the Fur family.
  
  
 0.574
KXG75912.1
Iron-sulfur flavoprotein.
 
     0.571
KXG75913.1
Hypothetical protein.
  
    0.489
plc
Phospholipase C.
  
     0.489
rd
Rubredoxin.
  
  
 0.476
fliM
Flagellar motor switch protein FliM.
    
 
 0.463
KXG75910.1
Hypothetical protein.
       0.442
gdh
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.442
gdhA
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.442
KXG75321.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.