Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG76006.1 | ackA | AN619_14700 | AN619_14690 | Hypothetical protein. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.707 |
KXG76006.1 | fapR | AN619_14700 | AN619_14720 | Hypothetical protein. | Transcription factor FapR. | 0.665 |
KXG76006.1 | rpmF | AN619_14700 | AN619_14710 | Hypothetical protein. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.984 |
KXG76006.1 | smc | AN619_14700 | AN619_00050 | Hypothetical protein. | Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.476 |
KXG76006.1 | tmcAL | AN619_14700 | AN619_14680 | Hypothetical protein. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.552 |
KXG77040.1 | polC | AN619_05680 | AN619_15440 | Hypothetical protein. | DNA polymerase III PolC-type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.662 |
KXG77040.1 | smc | AN619_05680 | AN619_00050 | Hypothetical protein. | Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.553 |
KXG77040.1 | tmcAL | AN619_05680 | AN619_14680 | Hypothetical protein. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.559 |
ackA | KXG76006.1 | AN619_14690 | AN619_14700 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Hypothetical protein. | 0.707 |
ackA | fapR | AN619_14690 | AN619_14720 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Transcription factor FapR. | 0.570 |
ackA | rpmF | AN619_14690 | AN619_14710 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.674 |
ackA | tmcAL | AN619_14690 | AN619_14680 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.632 |
fapR | KXG76006.1 | AN619_14720 | AN619_14700 | Transcription factor FapR. | Hypothetical protein. | 0.665 |
fapR | ackA | AN619_14720 | AN619_14690 | Transcription factor FapR. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.570 |
fapR | rpmF | AN619_14720 | AN619_14710 | Transcription factor FapR. | 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.675 |
fapR | tmcAL | AN619_14720 | AN619_14680 | Transcription factor FapR. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.497 |
hemN_1 | smc | AN619_00040 | AN619_00050 | Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR. | Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.686 |
hemN_1 | tmcAL | AN619_00040 | AN619_14680 | Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR. | Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. | 0.553 |
hemN_1 | yfiC | AN619_00040 | AN619_25770 | Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR. | tRNA1(Val) (adenine(37)-N6)-methyltransferase. | 0.554 |
polC | KXG77040.1 | AN619_15440 | AN619_05680 | DNA polymerase III PolC-type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Hypothetical protein. | 0.662 |
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