STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnA_2Glutamine synthetase. (645 aa)    
Predicted Functional Partners:
sfrB
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.844
purL
Phosphoribosylformylglycinamidine synthase subunit PurL.
 
 
 0.842
glmS
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
 
 0.767
cphA
Cyanophycin synthetase; Belongs to the MurCDEF family.
  
 
 0.762
nox
NADH oxidase.
  
 
 0.709
carB
Carbamoyl-phosphate synthase large chain.
  
 
 0.706
glsA2
Glutaminase 2; Belongs to the glutaminase family.
    
 0.694
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
    
 0.690
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
  
 
 0.685
arcC1
Carbamate kinase 1; Belongs to the carbamate kinase family.
     
 0.673
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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