Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG75437.1 | mntR | AN619_17010 | AN619_17000 | Hypothetical protein. | Transcriptional regulator MntR. | 0.491 |
fur_1 | mntR | AN619_07550 | AN619_17000 | Ferric uptake regulation protein; Belongs to the Fur family. | Transcriptional regulator MntR. | 0.442 |
glnQ | mntR | AN619_04350 | AN619_17000 | Glutamine transport ATP-binding protein GlnQ. | Transcriptional regulator MntR. | 0.678 |
metN | mntR | AN619_28980 | AN619_17000 | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | Transcriptional regulator MntR. | 0.678 |
mntR | KXG75437.1 | AN619_17000 | AN619_17010 | Transcriptional regulator MntR. | Hypothetical protein. | 0.491 |
mntR | fur_1 | AN619_17000 | AN619_07550 | Transcriptional regulator MntR. | Ferric uptake regulation protein; Belongs to the Fur family. | 0.442 |
mntR | glnQ | AN619_17000 | AN619_04350 | Transcriptional regulator MntR. | Glutamine transport ATP-binding protein GlnQ. | 0.678 |
mntR | metN | AN619_17000 | AN619_28980 | Transcriptional regulator MntR. | Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.678 |
mntR | perR | AN619_17000 | AN619_00570 | Transcriptional regulator MntR. | Transcriptional regulator PerR; Belongs to the Fur family. | 0.479 |
mntR | pgcA_2 | AN619_17000 | AN619_16990 | Transcriptional regulator MntR. | Phosphoglucomutase. | 0.502 |
mntR | tpx | AN619_17000 | AN619_09150 | Transcriptional regulator MntR. | Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | 0.459 |
mntR | znuA | AN619_17000 | AN619_10910 | Transcriptional regulator MntR. | High-affinity zinc uptake system binding-protein ZnuA; Belongs to the bacterial solute-binding protein 9 family. | 0.713 |
mntR | znuB | AN619_17000 | AN619_10930 | Transcriptional regulator MntR. | High-affinity zinc uptake system membrane protein ZnuB. | 0.727 |
mntR | znuC | AN619_17000 | AN619_10920 | Transcriptional regulator MntR. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.706 |
perR | mntR | AN619_00570 | AN619_17000 | Transcriptional regulator PerR; Belongs to the Fur family. | Transcriptional regulator MntR. | 0.479 |
perR | znuC | AN619_00570 | AN619_10920 | Transcriptional regulator PerR; Belongs to the Fur family. | High-affinity zinc uptake system ATP-binding protein ZnuC. | 0.450 |
pgcA_2 | mntR | AN619_16990 | AN619_17000 | Phosphoglucomutase. | Transcriptional regulator MntR. | 0.502 |
tpx | mntR | AN619_09150 | AN619_17000 | Putative thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily. | Transcriptional regulator MntR. | 0.459 |
znuA | mntR | AN619_10910 | AN619_17000 | High-affinity zinc uptake system binding-protein ZnuA; Belongs to the bacterial solute-binding protein 9 family. | Transcriptional regulator MntR. | 0.713 |
znuA | znuB | AN619_10910 | AN619_10930 | High-affinity zinc uptake system binding-protein ZnuA; Belongs to the bacterial solute-binding protein 9 family. | High-affinity zinc uptake system membrane protein ZnuB. | 0.999 |
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