STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG_53-oxoacyl-[acyl-carrier-protein] reductase FabG. (241 aa)    
Predicted Functional Partners:
KXG75456.1
Long-chain-fatty-acid--CoA ligase FadD13.
 
 0.898
por_1
Pyruvate synthase.
    
 0.885
por_2
Pyruvate synthase.
    
 0.885
queD
6-carboxy-5,6,7,8-tetrahydropterin synthase.
   
 
 0.839
KXG75457.1
Hypothetical protein.
  
 
 0.833
crp_1
cAMP-activated global transcriptional regulator CRP.
   
 
 0.829
crp_2
cAMP receptor protein.
   
 
 0.829
fabD
Malonyl CoA-acyl carrier protein transacylase.
 0.792
lpxD
UDP-3-O-acylglucosamine N-acyltransferase.
       0.779
fabF
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 0.758
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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