STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livH_3High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family. (284 aa)    
Predicted Functional Partners:
KXG75286.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
xylH_1
Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
KXG78450.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
lptB_3
Lipopolysaccharide export system ATP-binding protein LptB.
 
 0.986
livF_3
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
 0.976
braC
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein.
 
 
 0.955
lptB_1
Lipopolysaccharide export system ATP-binding protein LptB.
 
 0.943
lptB_2
Lipopolysaccharide export system ATP-binding protein LptB.
 
 0.943
livK
Leucine-specific-binding protein.
 
 0.915
KXG75428.1
Leu/Ile/Val-binding protein homolog 3.
 
 0.909
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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