Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG75179.1 | crp_1 | AN619_18780 | AN619_18750 | Hypothetical protein. | cAMP-activated global transcriptional regulator CRP. | 0.831 |
KXG75179.1 | por_1 | AN619_18780 | AN619_01900 | Hypothetical protein. | Pyruvate synthase. | 0.946 |
KXG75179.1 | por_2 | AN619_18780 | AN619_03950 | Hypothetical protein. | Pyruvate synthase. | 0.946 |
KXG76331.1 | crp_1 | AN619_12890 | AN619_18750 | Hypothetical protein. | cAMP-activated global transcriptional regulator CRP. | 0.831 |
KXG76331.1 | rpoB | AN619_12890 | AN619_21310 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
crp_1 | KXG75179.1 | AN619_18750 | AN619_18780 | cAMP-activated global transcriptional regulator CRP. | Hypothetical protein. | 0.831 |
crp_1 | KXG76331.1 | AN619_18750 | AN619_12890 | cAMP-activated global transcriptional regulator CRP. | Hypothetical protein. | 0.831 |
crp_1 | fabG_1 | AN619_18750 | AN619_09610 | cAMP-activated global transcriptional regulator CRP. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.829 |
crp_1 | fabG_2 | AN619_18750 | AN619_09640 | cAMP-activated global transcriptional regulator CRP. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.829 |
crp_1 | fabG_3 | AN619_18750 | AN619_11390 | cAMP-activated global transcriptional regulator CRP. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.829 |
crp_1 | glpF | AN619_18750 | AN619_29690 | cAMP-activated global transcriptional regulator CRP. | Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.922 |
crp_1 | por_1 | AN619_18750 | AN619_01900 | cAMP-activated global transcriptional regulator CRP. | Pyruvate synthase. | 0.883 |
crp_1 | por_2 | AN619_18750 | AN619_03950 | cAMP-activated global transcriptional regulator CRP. | Pyruvate synthase. | 0.883 |
crp_1 | queD | AN619_18750 | AN619_04660 | cAMP-activated global transcriptional regulator CRP. | 6-carboxy-5,6,7,8-tetrahydropterin synthase. | 0.939 |
crp_1 | rpoB | AN619_18750 | AN619_21310 | cAMP-activated global transcriptional regulator CRP. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.835 |
fabG_1 | crp_1 | AN619_09610 | AN619_18750 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | cAMP-activated global transcriptional regulator CRP. | 0.829 |
fabG_1 | fabG_2 | AN619_09610 | AN619_09640 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.650 |
fabG_1 | por_1 | AN619_09610 | AN619_01900 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Pyruvate synthase. | 0.885 |
fabG_1 | por_2 | AN619_09610 | AN619_03950 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Pyruvate synthase. | 0.885 |
fabG_1 | queD | AN619_09610 | AN619_04660 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 6-carboxy-5,6,7,8-tetrahydropterin synthase. | 0.839 |
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