Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG74737.1 | gerBA_2 | AN619_20770 | AN619_20790 | Hypothetical protein. | Spore germination protein B1. | 0.780 |
KXG74737.1 | gerBC_2 | AN619_20770 | AN619_20780 | Hypothetical protein. | Spore germination protein B3. | 0.780 |
KXG74737.1 | yndE_3 | AN619_20770 | AN619_20750 | Hypothetical protein. | Spore germination protein YndE. | 0.487 |
gerAA | gerBC_2 | AN619_28160 | AN619_20780 | Spore germination protein A1. | Spore germination protein B3. | 0.764 |
gerAA | spoIIM | AN619_28160 | AN619_08150 | Spore germination protein A1. | Stage II sporulation protein M. | 0.504 |
gerAA | yndE_1 | AN619_28160 | AN619_11520 | Spore germination protein A1. | Spore germination protein YndE. | 0.753 |
gerAA | yndE_2 | AN619_28160 | AN619_20740 | Spore germination protein A1. | Spore germination protein YndE. | 0.549 |
gerAA | yndE_3 | AN619_28160 | AN619_20750 | Spore germination protein A1. | Spore germination protein YndE. | 0.603 |
gerAA | yndE_4 | AN619_28160 | AN619_28140 | Spore germination protein A1. | Spore germination protein YndE. | 0.959 |
gerAA | ypeB_2 | AN619_28160 | AN619_11560 | Spore germination protein A1. | Sporulation protein YpeB. | 0.537 |
gerBA_1 | gerBC_2 | AN619_11510 | AN619_20780 | Spore germination protein B1. | Spore germination protein B3. | 0.783 |
gerBA_1 | spoIIM | AN619_11510 | AN619_08150 | Spore germination protein B1. | Stage II sporulation protein M. | 0.660 |
gerBA_1 | yndE_1 | AN619_11510 | AN619_11520 | Spore germination protein B1. | Spore germination protein YndE. | 0.959 |
gerBA_1 | yndE_2 | AN619_11510 | AN619_20740 | Spore germination protein B1. | Spore germination protein YndE. | 0.577 |
gerBA_1 | yndE_3 | AN619_11510 | AN619_20750 | Spore germination protein B1. | Spore germination protein YndE. | 0.653 |
gerBA_1 | yndE_4 | AN619_11510 | AN619_28140 | Spore germination protein B1. | Spore germination protein YndE. | 0.731 |
gerBA_1 | ypeB_2 | AN619_11510 | AN619_11560 | Spore germination protein B1. | Sporulation protein YpeB. | 0.699 |
gerBA_2 | KXG74737.1 | AN619_20790 | AN619_20770 | Spore germination protein B1. | Hypothetical protein. | 0.780 |
gerBA_2 | gerBC_2 | AN619_20790 | AN619_20780 | Spore germination protein B1. | Spore germination protein B3. | 0.956 |
gerBA_2 | spoIIM | AN619_20790 | AN619_08150 | Spore germination protein B1. | Stage II sporulation protein M. | 0.634 |
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