Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG74381.1 | KXG74802.1 | AN619_23640 | AN619_21430 | Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein. | 0.617 |
KXG74381.1 | cysS | AN619_23640 | AN619_21490 | Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.491 |
KXG74381.1 | mrnC | AN619_23640 | AN619_21480 | Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.576 |
KXG74802.1 | KXG74381.1 | AN619_21430 | AN619_23640 | Hypothetical protein. | Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.617 |
KXG74802.1 | KXG74803.1 | AN619_21430 | AN619_21440 | Hypothetical protein. | Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.975 |
KXG74802.1 | KXG75966.1 | AN619_21430 | AN619_14300 | Hypothetical protein. | Hypothetical protein. | 0.674 |
KXG74802.1 | cysS | AN619_21430 | AN619_21490 | Hypothetical protein. | Cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.896 |
KXG74802.1 | fusA_1 | AN619_21430 | AN619_21260 | Hypothetical protein. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.900 |
KXG74802.1 | fusA_2 | AN619_21430 | AN619_21650 | Hypothetical protein. | Elongation factor G. | 0.889 |
KXG74802.1 | ispE | AN619_21430 | AN619_11480 | Hypothetical protein. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.517 |
KXG74802.1 | mrnC | AN619_21430 | AN619_21480 | Hypothetical protein. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.945 |
KXG74802.1 | sigH | AN619_21430 | AN619_21420 | Hypothetical protein. | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | 0.814 |
KXG74802.1 | thyX | AN619_21430 | AN619_21460 | Hypothetical protein. | Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.552 |
KXG74803.1 | KXG74802.1 | AN619_21440 | AN619_21430 | Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Hypothetical protein. | 0.975 |
KXG74803.1 | cysS | AN619_21440 | AN619_21490 | Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.885 |
KXG74803.1 | mrnC | AN619_21440 | AN619_21480 | Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.913 |
KXG74803.1 | sigH | AN619_21440 | AN619_21420 | Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family. | 0.756 |
KXG74803.1 | thyX | AN619_21440 | AN619_21460 | Putative TrmH family tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.564 |
KXG75966.1 | KXG74802.1 | AN619_14300 | AN619_21430 | Hypothetical protein. | Hypothetical protein. | 0.674 |
KXG75966.1 | mrnC | AN619_14300 | AN619_21480 | Hypothetical protein. | Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.704 |
page 1 of 3