Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG73964.1 | KXG74142.1 | AN619_27210 | AN619_25610 | Hypothetical protein. | Hypothetical protein. | 0.401 |
KXG73964.1 | spoIIE | AN619_27210 | AN619_27200 | Hypothetical protein. | Stage II sporulation protein E. | 0.840 |
KXG73964.1 | ydcC | AN619_27210 | AN619_23530 | Hypothetical protein. | Sporulation protein YdcC. | 0.753 |
KXG74142.1 | KXG73964.1 | AN619_25610 | AN619_27210 | Hypothetical protein. | Hypothetical protein. | 0.401 |
KXG74142.1 | KXG74442.1 | AN619_25610 | AN619_23400 | Hypothetical protein. | Hypothetical protein. | 0.749 |
KXG74142.1 | spoIIE | AN619_25610 | AN619_27200 | Hypothetical protein. | Stage II sporulation protein E. | 0.682 |
KXG74142.1 | ydcC | AN619_25610 | AN619_23530 | Hypothetical protein. | Sporulation protein YdcC. | 0.752 |
KXG74442.1 | KXG74142.1 | AN619_23400 | AN619_25610 | Hypothetical protein. | Hypothetical protein. | 0.749 |
KXG74442.1 | spoIIE | AN619_23400 | AN619_27200 | Hypothetical protein. | Stage II sporulation protein E. | 0.461 |
KXG74442.1 | ydcC | AN619_23400 | AN619_23530 | Hypothetical protein. | Sporulation protein YdcC. | 0.731 |
KXG76481.1 | KXG76482.1 | AN619_10120 | AN619_10130 | Hypothetical protein. | Putative ABC transporter ATP-binding protein. | 0.998 |
KXG76481.1 | ydcC | AN619_10120 | AN619_23530 | Hypothetical protein. | Sporulation protein YdcC. | 0.901 |
KXG76481.1 | yknY | AN619_10120 | AN619_16560 | Hypothetical protein. | Putative ABC transporter ATP-binding protein YknY; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.967 |
KXG76482.1 | KXG76481.1 | AN619_10130 | AN619_10120 | Putative ABC transporter ATP-binding protein. | Hypothetical protein. | 0.998 |
KXG76482.1 | ydcC | AN619_10130 | AN619_23530 | Putative ABC transporter ATP-binding protein. | Sporulation protein YdcC. | 0.846 |
alr | nnr | AN619_23520 | AN619_23550 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to al [...] | 0.753 |
alr | ydcC | AN619_23520 | AN619_23530 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Sporulation protein YdcC. | 0.758 |
cwlD | ydcC | AN619_20830 | AN619_23530 | Germination-specific N-acetylmuramoyl-L-alanine amidase. | Sporulation protein YdcC. | 0.892 |
nnr | alr | AN619_23550 | AN619_23520 | Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to al [...] | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.753 |
nnr | ydcC | AN619_23550 | AN619_23530 | Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to al [...] | Sporulation protein YdcC. | 0.767 |
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