Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXG74156.1 | KXG74392.1 | AN619_25750 | AN619_23750 | Hypothetical protein. | Hypothetical protein. | 0.552 |
KXG74156.1 | KXG78964.1 | AN619_25750 | AN619_01240 | Hypothetical protein. | Hypothetical protein. | 0.428 |
KXG74156.1 | rsmI | AN619_25750 | AN619_25760 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.611 |
KXG74156.1 | yfiC | AN619_25750 | AN619_25770 | Hypothetical protein. | tRNA1(Val) (adenine(37)-N6)-methyltransferase. | 0.610 |
KXG74392.1 | KXG74156.1 | AN619_23750 | AN619_25750 | Hypothetical protein. | Hypothetical protein. | 0.552 |
KXG78964.1 | KXG74156.1 | AN619_01240 | AN619_25750 | Hypothetical protein. | Hypothetical protein. | 0.428 |
rsmI | KXG74156.1 | AN619_25760 | AN619_25750 | Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | Hypothetical protein. | 0.611 |
rsmI | yfiC | AN619_25760 | AN619_25770 | Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | tRNA1(Val) (adenine(37)-N6)-methyltransferase. | 0.982 |
yfiC | KXG74156.1 | AN619_25770 | AN619_25750 | tRNA1(Val) (adenine(37)-N6)-methyltransferase. | Hypothetical protein. | 0.610 |
yfiC | rsmI | AN619_25770 | AN619_25760 | tRNA1(Val) (adenine(37)-N6)-methyltransferase. | Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.982 |