STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnsCTransposon Tn7 transposition protein TnsC. (551 aa)    
Predicted Functional Partners:
tnsA
Transposon Tn7 transposition protein TnsA.
 
 
 
 0.995
tnsB
Transposon Tn7 transposition protein TnsB.
 
 0.993
KXG74021.1
Hypothetical protein.
 
   
 0.966
KXG73706.1
Hypothetical protein.
  
     0.768
KXG78952.1
Hypothetical protein.
  
 
 0.752
KXG76213.1
Hypothetical protein.
    
   0.700
KXG75731.1
Hypothetical protein.
    
   0.700
KXG75277.1
Hypothetical protein.
    
   0.700
xerC_1
Tyrosine recombinase XerC; Belongs to the 'phage' integrase family.
  
     0.522
KXG75601.1
Hypothetical protein.
  
     0.432
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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