STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG73918.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
KXG73917.1
Hypothetical protein.
  
  
 0.932
yycG_2
Sensor histidine kinase YycG.
 
  
 0.845
KXG75963.1
Hypothetical protein.
  
     0.766
KXG75532.1
Hypothetical protein.
  
     0.743
KXG74181.1
Hypothetical protein.
  
     0.731
yycJ
Putative metallo-hydrolase YycJ.
  
  
 0.727
sap_1
S-layer protein sap.
  
     0.713
KXG74985.1
Hypothetical protein.
  
     0.708
KXG76312.1
Hypothetical protein.
  
     0.705
KXG74451.1
Hypothetical protein.
  
     0.703
Your Current Organism:
Thermotalea metallivorans
NCBI taxonomy Id: 520762
Other names: Clostridiaceae bacterium B2-1, DSM 21119, JCM 15105, KCTC 5625, T. metallivorans, Thermotalea metallivorans Ogg and Patel 2009, strain B2-1
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