Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
citS | dcuR | AN619_29980 | AN619_30790 | Sensor protein CitS. | Transcriptional regulatory protein DcuR. | 0.870 |
citS | dcuS_1 | AN619_29980 | AN619_25380 | Sensor protein CitS. | Sensor histidine kinase DcuS. | 0.687 |
citS | dcuS_2 | AN619_29980 | AN619_30220 | Sensor protein CitS. | Sensor histidine kinase DcuS. | 0.867 |
citS | dcuS_3 | AN619_29980 | AN619_30800 | Sensor protein CitS. | Sensor histidine kinase DcuS. | 0.678 |
citS | dpiB_1 | AN619_29980 | AN619_09490 | Sensor protein CitS. | Sensor histidine kinase DpiB. | 0.696 |
citS | dpiB_2 | AN619_29980 | AN619_29790 | Sensor protein CitS. | Sensor histidine kinase DpiB. | 0.666 |
citS | rpfG_3 | AN619_29980 | AN619_04070 | Sensor protein CitS. | Cyclic di-GMP phosphodiesterase response regulator RpfG. | 0.481 |
citS | tmoS | AN619_29980 | AN619_04450 | Sensor protein CitS. | Sensor histidine kinase TmoS. | 0.428 |
dcuR | citS | AN619_30790 | AN619_29980 | Transcriptional regulatory protein DcuR. | Sensor protein CitS. | 0.870 |
dcuR | dcuS_1 | AN619_30790 | AN619_25380 | Transcriptional regulatory protein DcuR. | Sensor histidine kinase DcuS. | 0.930 |
dcuR | dcuS_2 | AN619_30790 | AN619_30220 | Transcriptional regulatory protein DcuR. | Sensor histidine kinase DcuS. | 0.927 |
dcuR | dcuS_3 | AN619_30790 | AN619_30800 | Transcriptional regulatory protein DcuR. | Sensor histidine kinase DcuS. | 0.989 |
dcuR | dpiB_1 | AN619_30790 | AN619_09490 | Transcriptional regulatory protein DcuR. | Sensor histidine kinase DpiB. | 0.944 |
dcuR | dpiB_2 | AN619_30790 | AN619_29790 | Transcriptional regulatory protein DcuR. | Sensor histidine kinase DpiB. | 0.930 |
dcuR | fliN | AN619_30790 | AN619_15120 | Transcriptional regulatory protein DcuR. | Flagellar motor switch protein FliN. | 0.775 |
dcuR | rpfG_3 | AN619_30790 | AN619_04070 | Transcriptional regulatory protein DcuR. | Cyclic di-GMP phosphodiesterase response regulator RpfG. | 0.780 |
dcuR | tmoS | AN619_30790 | AN619_04450 | Transcriptional regulatory protein DcuR. | Sensor histidine kinase TmoS. | 0.754 |
dcuR | walR_4 | AN619_30790 | AN619_25140 | Transcriptional regulatory protein DcuR. | Transcriptional regulatory protein WalR. | 0.589 |
dcuS_1 | citS | AN619_25380 | AN619_29980 | Sensor histidine kinase DcuS. | Sensor protein CitS. | 0.687 |
dcuS_1 | dcuR | AN619_25380 | AN619_30790 | Sensor histidine kinase DcuS. | Transcriptional regulatory protein DcuR. | 0.930 |
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