STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG78362.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
KXG78363.1
Hypothetical protein.
       0.773
gtaB
UTP--glucose-1-phosphate uridylyltransferase.
       0.737
KXG78360.1
Hypothetical protein.
       0.661
KXG78359.1
Hypothetical protein.
       0.638
KXG78358.1
Hypothetical protein.
       0.582
KXG78365.1
Hypothetical protein.
  
  
 0.559
truD
tRNA pseudouridine synthase D.
       0.479
KXG78357.1
Hypothetical protein.
       0.418
Your Current Organism:
Fervidicola ferrireducens
NCBI taxonomy Id: 520764
Other names: DSM 21121, F. ferrireducens, Fervidicola ferrireducens Ogg and Patel 2009, JCM 15106, KCTC 5610, Thermoanaerobacteriaceae bacterium Y170, strain Y170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.