STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adh1Long-chain-alcohol dehydrogenase 1. (382 aa)    
Predicted Functional Partners:
sfrB
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.921
hndC_3
NADP-reducing hydrogenase subunit HndC.
  
 
 0.806
cfiA
2-oxoglutarate carboxylase large subunit.
    
 0.771
hndC_1
NADP-reducing hydrogenase subunit HndC.
  
 
 0.708
KXG78394.1
Oxalate oxidoreductase subunit delta.
  
 
 0.703
rebO
Flavin-dependent L-tryptophan oxidase RebO.
     
 0.659
dhaD
Glycerol dehydrogenase.
   
 
0.592
yvgN
Glyoxal reductase.
  
 0.547
hndC_2
NADP-reducing hydrogenase subunit HndC.
  
 
  0.528
adh2
Long-chain-alcohol dehydrogenase 2.
  
  
0.482
Your Current Organism:
Fervidicola ferrireducens
NCBI taxonomy Id: 520764
Other names: DSM 21121, F. ferrireducens, Fervidicola ferrireducens Ogg and Patel 2009, JCM 15106, KCTC 5610, Thermoanaerobacteriaceae bacterium Y170, strain Y170
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.