STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mazGNucleoside triphosphate pyrophosphohydrolase. (265 aa)    
Predicted Functional Partners:
ydaM_1
Putative diguanylate cyclase YdaM.
  
 
  0.903
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.900
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
  0.889
spoVB
Stage V sporulation protein B.
  
    0.823
thrS
Threonine--tRNA ligase 1.
    
  0.801
spoVT
Stage V sporulation protein T.
      0.774
ddrOC
HTH-type transcriptional regulator DdrOC.
     
 0.765
nasF
Uroporphyrinogen-III C-methyltransferase.
    
  0.747
pdtaR
Putative transcriptional regulatory protein pdtaR.
    
  0.743
KXG78779.1
Hypothetical protein.
    
  0.743
Your Current Organism:
Fervidicola ferrireducens
NCBI taxonomy Id: 520764
Other names: DSM 21121, F. ferrireducens, Fervidicola ferrireducens Ogg and Patel 2009, JCM 15106, KCTC 5610, Thermoanaerobacteriaceae bacterium Y170, strain Y170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.