STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYO68576.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
yxlF
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.983
yycG_1
Sensor histidine kinase YycG.
 
   
 0.932
walR_1
Transcriptional regulatory protein WalR.
 
  
 0.915
KYO68575.1
Hypothetical protein.
 
   
0.905
blaR1
Regulatory protein BlaR1.
 
     0.679
KYO65251.1
Hypothetical protein.
  
     0.529
blaI
Penicillinase repressor.
       0.473
KYO68573.1
Hypothetical protein.
       0.417
KYO68738.1
Hypothetical protein.
  
     0.406
KYO68581.1
Hypothetical protein.
       0.402
Your Current Organism:
Thermovenabulum gondwanense
NCBI taxonomy Id: 520767
Other names: DSM 21133, KCTC 5616, T. gondwanense, Thermovenabulum gondwanense Ogg et al. 2010 emend. Pradel et al. 2013, Thermovenabulum sp. R270, strain R270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.