Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
cwlDGermination-specific N-acetylmuramoyl-L-alanine amidase. (240 aa)    
Predicted Functional Partners:
lytC
N-acetylmuramoyl-L-alanine amidase LytC.
  
  
 
0.843
lytB_1
Amidase enhancer.
 
 
0.762
yabP
Spore protein YabP.
  
  
 0.612
lytB_3
Amidase enhancer.
  
 0.569
stp_1
Multidrug resistance protein Stp; Belongs to the major facilitator superfamily.
       0.568
sipT
Signal peptidase I T; Belongs to the peptidase S26 family.
       0.563
KYO68564.1
Hypothetical protein.
    
   0.546
nnr
Bifunctional NAD(P)H-hydrate repair enzyme Nnr; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to al [...]
 
   
 0.519
cinA_2
Putative competence-damage inducible protein; Belongs to the CinA family.
 
     0.502
ykuD
Putative L,D-transpeptidase YkuD.
    
 0.483
Your Current Organism:
Thermovenabulum gondwanense
NCBI taxonomy Id: 520767
Other names: DSM 21133, KCTC 5616, T. gondwanense, Thermovenabulum gondwanense Ogg et al. 2010 emend. Pradel et al. 2013, Thermovenabulum sp. R270, strain R270
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