STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYO66905.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
KYO66904.1
Hypothetical protein.
       0.751
KYO66906.1
Hypothetical protein.
       0.729
siaT_3
Sialic acid TRAP transporter permease protein SiaT.
       0.702
siaT_4
Sialic acid TRAP transporter permease protein SiaT.
       0.702
KYO66902.1
Hypothetical protein.
       0.695
KYO66903.1
Hypothetical protein.
       0.694
KYO66901.1
Hypothetical protein.
       0.672
rocR_4
Arginine utilization regulatory protein RocR.
       0.608
yiaO_3
2,3-diketo-L-gulonate-binding periplasmic protein YiaO.
       0.520
Your Current Organism:
Thermovenabulum gondwanense
NCBI taxonomy Id: 520767
Other names: DSM 21133, KCTC 5616, T. gondwanense, Thermovenabulum gondwanense Ogg et al. 2010 emend. Pradel et al. 2013, Thermovenabulum sp. R270, strain R270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.