STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYO67010.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
KYO67009.1
Ribonuclease VapC15.
 
   0.982
KYO66948.1
Ribonuclease VapC11.
 
   0.894
KYO66924.1
Hypothetical protein.
  
     0.531
KYO66896.1
Hypothetical protein.
  
     0.508
cobO_1
Cob(I)yrinic acid a,c-diamide adenosyltransferase.
       0.497
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
       0.476
KYO66572.1
Hypothetical protein.
  
     0.460
KYO66922.1
Hypothetical protein.
 
     0.457
KYO67013.1
Hypothetical protein.
       0.456
cbiN
Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
       0.456
Your Current Organism:
Thermovenabulum gondwanense
NCBI taxonomy Id: 520767
Other names: DSM 21133, KCTC 5616, T. gondwanense, Thermovenabulum gondwanense Ogg et al. 2010 emend. Pradel et al. 2013, Thermovenabulum sp. R270, strain R270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.