STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYO65837.1Hypothetical protein. (148 aa)    
Predicted Functional Partners:
epsE_2
Type II secretion system protein E.
  
 0.940
epsF
Type II secretion system protein F.
  
  
 0.934
comC
Type 4 prepilin-like proteins leader peptide-processing enzyme.
  
  
 0.872
KYO65145.1
Hypothetical protein.
 
  
 0.735
KYO65833.1
Hypothetical protein.
 
  
 0.720
KYO65835.1
Hypothetical protein.
  
  
 0.693
comFB
ComF operon protein 2.
  
    0.677
KYO65832.1
Hypothetical protein.
  
  
 0.637
KYO65836.1
Hypothetical protein.
       0.636
KYO65831.1
Hypothetical protein.
  
  
 0.574
Your Current Organism:
Thermovenabulum gondwanense
NCBI taxonomy Id: 520767
Other names: DSM 21133, KCTC 5616, T. gondwanense, Thermovenabulum gondwanense Ogg et al. 2010 emend. Pradel et al. 2013, Thermovenabulum sp. R270, strain R270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.