STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
manR_2Transcriptional regulator ManR. (159 aa)    
Predicted Functional Partners:
gatC_2
Galactitol permease IIC component.
 
 
 0.996
gatB_2
Galactitol-specific phosphotransferase enzyme IIB component.
 
 
 0.994
dgaR_1
Transcriptional regulatory protein DagR.
 
   
 0.875
crh
HPr-like protein Crh.
  
 
 0.871
manR_1
Transcriptional regulator ManR.
 
 
 0.788
KYO65265.1
Hypothetical protein.
 
    0.768
mtlR
Transcriptional regulator MtlR.
 
 
 0.697
ulaA
Ascorbate-specific permease IIC component UlaA.
 
 
 0.662
ulaB
Ascorbate-specific phosphotransferase enzyme IIB component.
 
 
 0.643
dgaR_2
Transcriptional regulatory protein DagR.
 
   
 0.634
Your Current Organism:
Thermovenabulum gondwanense
NCBI taxonomy Id: 520767
Other names: DSM 21133, KCTC 5616, T. gondwanense, Thermovenabulum gondwanense Ogg et al. 2010 emend. Pradel et al. 2013, Thermovenabulum sp. R270, strain R270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.