STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnQ_2Glutamine transport ATP-binding protein GlnQ. (240 aa)    
Predicted Functional Partners:
yecS
Inner membrane amino-acid ABC transporter permease protein YecS.
 0.999
artQ
Arginine transport system permease protein ArtQ.
 0.999
artP
Arginine-binding extracellular protein ArtP; Belongs to the bacterial solute-binding protein 3 family.
 0.994
tcyA
L-cystine-binding protein TcyA; Belongs to the bacterial solute-binding protein 3 family.
 0.919
KYO65260.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.902
oppC
Oligopeptide transport system permease protein OppC.
 
    
 0.901
macB
Macrolide export ATP-binding/permease protein MacB.
 
      0.900
gsiD
Glutathione transport system permease protein GsiD.
 
    
 0.892
livH_3
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.886
KYO67059.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.860
Your Current Organism:
Thermovenabulum gondwanense
NCBI taxonomy Id: 520767
Other names: DSM 21133, KCTC 5616, T. gondwanense, Thermovenabulum gondwanense Ogg et al. 2010 emend. Pradel et al. 2013, Thermovenabulum sp. R270, strain R270
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